Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVFAHRMDNSKPHLIIPTLLVPLQNRSCTETATPLPSQYLMELSEEHSWMSNQTDLHYVLKPGEVATASIFFGILWLFSIFGNSLVCLVIHRSRRTQSTTNYFVVSMACADLLISVASTPFVLLQFTTGRWTLGSATCKVVRYFQYLTPGVQIYVLLSICIDRFYTIVYPLSFK--VSREKAKKMIAASWVFDA--GFVTPVLFFYGSNWDSH---------CNYFLPSSWEGTAYTVIHFLVGFVIPSVLIILFYQKVIKYIWRIGTDGRTVRRTMNIVPRTKVKTIKMFLILNLLFLLSWLPFHVAQLWHPHEQDYKKSSLVFTAITWISFSSSASKPTLYSIYNANFRRGMKETFCMSSMKCYRSNAYTITTSSRMAKKNYVGISEIPSMAKTITKDSIYDSFDREAKEKKLAWPINSNPPNTFV |
| 3ZPR Chain:A ((12-297)) | -----------------------------------------------------------------AGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFL-PIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------------MLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWL-FVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLL---------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -182347 for 1930 contacts (-94.5/contact) +
2D Compatibility (PS) -25902 + (NN) -1946 + (LL) 10044
1D Compatibility (HY) -25200 + (ID) 3600
Total energy: -228951.0 ( -118.63 by residue)
QMean score : 0.233
|
|
|