Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMWGAGSPLAWLSAGSGNVNVSSVGPAEGPTGPAAPLPSPKAWDVVLCISGTLVSCENALVVAIIVGTPAFRAPMFLLVGSLAVADLLAGLGLVLHFAAV----FCIGSAEMSLVLVGVLAMAFTASIGSLLAITVDRYLSLYNALTYYSETTVTRTYVMLALVWGGALGLGLLPVLAWN------CLDGLTTCGVVYPLSKNHLVVLAIAFFMVFG-------IMLQLYAQICRIVCRHAQQIALQRHLLPASHYVAT-RKGI---ATLAVVLGAFAACWLP------FTVYCLLGDAHSPPLYTYLTLLPATYNSMINPIIYAFRNQDVQKVLWAVCCCCSSSKIPFRSRSPSDV |
3UZA Chain:A ((44-299)) | -----------------------------------------------------------------------------FVVSLAAADILVGV-LAIPFAITISTGFCAACHGCLFIACFVLVLA-QSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQPGCGEGQVACLFEDVVPMNYMV-----YFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQP--LPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFC-PDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS---------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -193305 for 1491 contacts (-129.6/contact) +
2D Compatibility (PS) -22687 + (NN) -8309 + (LL) 5984
1D Compatibility (HY) -22400 + (ID) 4050
Total energy: -244767.0 ( -164.16 by residue)
QMean score : 0.252
|
|
|