Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNESRWTEWRILNMSSGIVNVSERHSCPLGFGHYSVVDVCIFETVVIVLLTFLIIAGNLTVIFVFHCAPLLHHYTTSYFIQTMAYADLFVGVSCLVPTLSLLHYSTGVHESLTCQVFGYIISVLKSVSMACLACISVDRYLAITKPLSYNQLVTPCRLRICIILIWIYSCLI-FLPSFFGWGK------------PGYHGDIFEWCATSWLTSAYFTGFIVCLLYAPAAFVVCFTYFHIFKICRQHTKEINDRRARFPSHEVDSSRETGHSPDRRYAMVLFRITSVFYMLWLPYIIYFLLESSRVLDN---PTLSFLT-TWLAISNSFCNCVIYSLSNSVFRLGLRRLSETMCTSCMCVKDQEAQEPKPRKRANSCSI |
2Y03 Chain:A ((15-298)) | -------------------------------------------SLLMALVVLLIVAGNVLVIAAIGSTQRLQTLT-NLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPG--------CCDFVTNRAYAIASSIISFYIP-LLIMIFVALRVYREAKEQIR-----------SRVMLMRE--HKALKTLGIIM----GVFTLCWLP---FFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPD-FRKAFKRLLA---------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -269417 for 1905 contacts (-141.4/contact) +
2D Compatibility (PS) -25747 + (NN) 1365 + (LL) 6784
1D Compatibility (HY) -30800 + (ID) 3950
Total energy: -321765.0 ( -168.91 by residue)
QMean score : 0.255
|
|
|