Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRHHLQDHFLEIDKKNCCVFRDDFIAKVLPPVL---GLEFIFGLLGNGLALWIFCFHLKSWKSSRIFLFNLAVADFLLIICLPFVMDYYVRRSDWKFGDIPCRLVLFMFAMNRQGSIIFLTVVAVDRYFRVVHPHHALNKISNWTAAIISCLLWGITVGLTVHLLKKKLLIQNGTANVCIS----FSICHTFRWHEAMFLLEFFLPLGIILFCSARIIWSLRQRQMDRHAKIKRAITFIMVVAIVFVICFLPSVVVRIHIFWLLHTSGTQNCEVYRSVDLAFFITLSFTYMNSMLDPVVYYFSSPSFPNFFSTLINRCLQRKITGEPDNNRSTSVELTGDPNKTRGAPEALIANSGEPWSPSYLGPTSNNHSKKGHCHQEPASLEKQLGCCIE |
| 4XT1 Chain:A ((31-318)) | ------------------CVFTD-VLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLD-------SVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVK----QACLFSIFWWIFAVIIAI----PHFMVVTKKDNQCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRV---LIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281062 for 2032 contacts (-138.3/contact) +
2D Compatibility (PS) -27882 + (NN) -2310 + (LL) 4160
1D Compatibility (HY) -34800 + (ID) 3700
Total energy: -345594.0 ( -170.08 by residue)
QMean score : 0.203
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