Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVIMGQCYYNETIGFFYNNSGKELSSHWRPKDVVVVALGLTVSVLVLLTNLLVIAAIASNRRFHQPIYYLLGNLAAADLFAGVAYLFLMFHTGPRTARLSLEGWFLRQGLLDTSLTAS-VATLLAIAVERHRSVMAVQLHSRLPRG-RVVMLIVGVWVAALGLGLLP--------------AHSWHCLCALDRC--SRMAPLLSRSYLAVWALSSLLVFLLMVAVYTRIFFYVRRRVQRMAEHVSCHPRYRETTLSLV---KTVVIILGAFVVCWTPGQVVLLLDGLGCESCNVLAVEKYFL--LLAEANSLVNAAVYSCRDAEMRRTFRRLLCCACLRQSTRESVHYTSSAQGGASTRIMLPENGHPLMDSTL |
| 4UHR Chain:A ((8-311)) | ---------------------------------VYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGV--LAIPFAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKA---GCGEGQVACLFEDVVPMNYMVYFNFFA-CVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFF-CPDC-HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAAA------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218932 for 2081 contacts (-105.2/contact) +
2D Compatibility (PS) -28624 + (NN) -12242 + (LL) 3104
1D Compatibility (HY) -26400 + (ID) 4400
Total energy: -287494.0 ( -138.15 by residue)
QMean score : 0.292
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