Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNASCCLPSVQPTLPNGSEHLQAPFFSNQSSSAFCEQVFIKPEVFLSLGIVSLLENILVILAVVRNGNLHSPMYFFLCSLAVADMLVSVSNALETIMIAIVHSDYLTFEDQFIQ--HMDNIFDSMICISLVASICNLLAIAVDRYVTIFYALRYHSIMTVRKALTLIVAIWVCCGVCGVVFIV--------YSES--KMVIVCLIT-----------MFFA----MMLLMGTLYVHMFLFARLHVKRIAALP-PADGVAPQQHSCMKGAVTITILLGVFIFCWAPFFLHLVLIIT-----CPTNPYCICYTAHFNTYLVLIMCNSVIDPLIYAFRSLELRNTFREILCGCNGMNLG |
3UZA Chain:A ((12-303)) | -------------------------------------------VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGV--------LAIPFA--ITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP---GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLP--LHIINCFTFFCPDCSHAPLWLMYLA-----IVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -300893 for 1891 contacts (-159.1/contact) +
2D Compatibility (PS) -25451 + (NN) -6469 + (LL) 3380
1D Compatibility (HY) -29200 + (ID) 4500
Total energy: -363133.0 ( -192.03 by residue)
QMean score : 0.367
|
|
|