Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSSFHLHFLDLNLNATEGNLSGPNVKNKSSPCEDMGIAVEVFLTLGVISLLENILVIGAIVKNKNLHSPMYFFVCSLAVADMLVSMSSAWETITIYLLNNKHLVIADAFVR--HIDNVFDSMICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTARRSGAIIAGIWAFC-----------------TGCG--IVFILYSESTYVILCLISMFFA----MLFLLVSLYIHMFLLARTHVKRIAALPGASSARQRTSMQ----GAVTVTMLLGVFTVCWAPFFLHLTLMLSCPQNLYCSRFMSHFNMYLILIMC--NSVMDPLIYAFRSQEMRKTFKEIICCRGFRIACSFPRRD |
| 3UZA Chain:A ((7-303)) | ------------------------------------SVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAITI----------STGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP-GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQP-LPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWL----MYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -277125 for 1894 contacts (-146.3/contact) +
2D Compatibility (PS) -26872 + (NN) -10229 + (LL) 2684
1D Compatibility (HY) -31600 + (ID) 4450
Total energy: -347592.0 ( -183.52 by residue)
QMean score : 0.424
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