Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLNSSAPGTPGTPAADPFQRAQAGLEEALLAPGFGNASGNASERVLAAPSSELDVNTDIYSKVLVTAVYLALFVVGTVGNTVTAFTLARKKSLQSLQSTVHYHLGSLALSDLLTLLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVERYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAVPMLFTMGEQNRSADGQHAGGLVCTPTIHTATVKVVIQVNTFMSFIFPMVVISVLNTIIANKLTVMVRQAAEQGQVCTVGGEHSTFSMAIEPGRVQALRH--GVRVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTPFLYDFYHYFYMVTNALFYVSSTINPILYNLVSANFRHIFLATLACLCPVWRRRRKR-PAFSRKADSVSSNHTLSSNATRETLY |
| 2Y03 Chain:A ((16-300)) | ----------------------------------------------------------------LLMALVVLLIVAGNV------LVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFG--ATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISAL--VSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIM----IFVALRVY---REAKEQIR-----------------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDL--VP------DWLFVAFNWLGYANSAMNPIIY----------------CRSPDFRKAFKRLLA------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191861 for 2024 contacts (-94.8/contact) +
2D Compatibility (PS) -28252 + (NN) -11191 + (LL) 8788
1D Compatibility (HY) -25600 + (ID) 4150
Total energy: -252266.0 ( -124.64 by residue)
QMean score : 0.345
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