Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIVSTGNETITEFVLLGFYDIPELHFLFFIVFTAVYVFIIIGNMLIIVAVVSSQRLHKPMYIFLANLSFLDILYTSAVMPKMLEGFLQEATISVAGCLLQFFIFGSL------------ATAECLLLAVMAYDRYLAICYPLHYPLLMGPRRYMGLVVTTWLSGFVVDGLVVALVAQLRFCGPNHIDQFYCDFMLFVGLACSDPRVAQVTTLILSVFCLTIPFGLILTSYARIVVAVLRVPAGASR-----RRAFSTCSSHLAVVTTFYGTLMIFYVAPSAVHSQLLSKVFSLLYTV--VTPLFNPVIYTMRNKEVHQALRKILCIKQTETLD |
4QKX Chain:A ((187-463)) | ------------------------------IVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVP-----------FGAACILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVW----IVSGLTSFLPIQMHWYRATHQEAINC----YAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ---KFALKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258344 for 1807 contacts (-143.0/contact) +
2D Compatibility (PS) -25360 + (NN) -815 + (LL) 4908
1D Compatibility (HY) -23600 + (ID) 3300
Total energy: -306511.0 ( -169.62 by residue)
QMean score : 0.352
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