Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNTSSSDFTLLGLLVNSEAAGIVFTVILAVFLGAVTANLVMIFLIQVDSRLHTPMYFLLSQLSIMDTLFICTTVPKLLADMVSKEKIISFVACGIQIFLYLTMIGSEFFLLGLMAYDCYVAVCNPLRYPVLMNRKKCLLLAAGAWFGGSLDGFLLTPITMNVPYCGSRSINHFFC-EIPAVLKL----ACADTSLYETLMYICCVLMLLIPISIIS----TSYSLILLTIHRMPSAEGRKKAFTTCSSH-LTVVSIFYGA------AFYTYVLPQSFH---TPEQDKVVSAFYTIVTPMLNPLIYSLRNKDVIGAFKKVFACCSSAQKVATSDA |
| 2YCZ Chain:A ((9-299)) | -----------------QWEAGMSLLMALVVLL-IVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFL--PIMM-----------HWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -247605 for 1919 contacts (-129.0/contact) +
2D Compatibility (PS) -27511 + (NN) -4522 + (LL) 2004
1D Compatibility (HY) -20800 + (ID) 3450
Total energy: -301884.0 ( -157.31 by residue)
QMean score : 0.312
|
|
|