Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSSGSSHPFLLTGFPGLEEAHHWISVFFLFMYISILFGNGTLLLLIKEDHNLHEPMYFFLAMLAATDLGLALTTMPTVLGVLWLDHREIGSAA----CFSQAYFIHSLSFLESGILLAMAYDRFIAICNPLRYTSVLTNTR---------VVKIGLGVL-MRGFVSVVPPIRPLYFFLYCHSHVLSHAFCLHQDVIKLACADTTFNRLYPAVLVVFIFVLD-YLIIFISYVLILKTVLSIASREERAKALITCVSHICCVLVFYVTVIGLS-----LIHRFGKQVPHIVHLIMSYAYFLF-----PPLMNPITYSVKTKQIQNAILHLFTTHRIGT |
4UG2 Chain:A ((21-306)) | ------------------------------------ILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAI------STGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKAHSQGCGEGQVA---CLFEDVVPM--NYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQL------------ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222389 for 1801 contacts (-123.5/contact) +
2D Compatibility (PS) -24693 + (NN) -5540 + (LL) 4756
1D Compatibility (HY) -20400 + (ID) 3200
Total energy: -271466.0 ( -150.73 by residue)
QMean score : 0.229
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