Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNKSASTFQLTGFPGMEKAHHWIFIPLLAAYISILLGNGTLLFLIRNDHNLHEPMYYFLAMLAATDLGVTLTTMPTVLGVLWLDHREIGHGACFSQAYFIHTLSVMESGVLLAMAYDCFITIRSPLRYTSILTNTQVMK-IGVRVLTRAGLSIMPIVVRLHWF-----PYCRSHVL----SHAFCLHQDVIKLACADITFNRLYPVVVLFAMVLLDFLIIFFSYILILKTVMGIGSGGERAKALNTCVSHIC------------CILVFYVTVVCLTFIHRFGKHVP-HVVHITMSYIHFLFPPFMNPFIYSIKTKQIQSGILRLFSLPHSRA |
| 3PWH Chain:A ((14-297)) | -----------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAITIS-TGFCAACHG-CLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPM---LGWNNCGQP--------GCGEGQVACLFEDVVPMN-YMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHI-INCFTFFCPDCSHAPLWLMYLAIVLAH--TNSVVNPFIYAYRIREFRQTFRKIIRS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231825 for 1870 contacts (-124.0/contact) +
2D Compatibility (PS) -24895 + (NN) -4641 + (LL) 3980
1D Compatibility (HY) -18400 + (ID) 3500
Total energy: -279281.0 ( -149.35 by residue)
QMean score : 0.227
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