Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQVTNTTQEGIYFILTDIPGFEASHIWISIPVCCLYTISIMGNTTILTVIRTEPSVHQRMYLFLSMLALTDLGLTLTTLPTVMQLLWFNVRRISSEAC--FAQFFFLHGFSFMESSVLLAMSVDCYVAICCPLHYASILTNEVIGRTGLAIICCCVLAVLPSLFLLKRLPFCHSHLLSRSYCLHQDMIRLVCADIRLNSWYGFALALLIIIVDPLLIVISYTLILKNILGTATWAERLRALNNC--------------LSHILAVLVL-YIPMVGVSMTHRFAKHASPLVHVIMANIYLLAPPVMNPIIYSVKNKQIQWGMLNFLSLKNMHSR |
| 2Y00 Chain:A ((26-285)) | ----------------------------------------VAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIET--LCVIAIDRYLAITSPFRYQSLMT-----RARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYI-PLLIMIFVAL---RVYREAK--EQ-------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246786 for 1677 contacts (-147.2/contact) +
2D Compatibility (PS) -23370 + (NN) -5758 + (LL) 5800
1D Compatibility (HY) -22400 + (ID) 3100
Total energy: -295614.0 ( -176.28 by residue)
QMean score : 0.142
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