Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAGRMSTSNHTQFHPSSFLLLGIPGLEDVHIWIGVPFFFVYLVALLGNTALLFVIQTEQSLHEPMYYFLAMLDSIDLGLSTATIPKMLGIFWFNTKEISFGGCLSHMFFIHFFTAMESIVLVAMAFDRYIAICKPLRYTMILT-SKIISLIAGIAVLRSLYMVVPLVFLLLRLPFCGHRIIPHTYCEHMGIARLAC---ASIKVNIRFGLGNISLLLLDVILIILSYVRILYAVF---CLPSWEAR--LKALNTCGSHIGVILAFFTPAF--------FSFLTHRFGHNIP---QYIHIILANLYVVVPPALNPVIYGVRTKQIRERVLRIFLKTNH
4UG2 Chain:A ((16-302))---------------------------------------IAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAIS--TGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTP----MLGWNNCGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQL------ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSH-APLWLMYLAIVLSHTNSVV----NPFIYAYRIREFRQTFRKIIRSHVL


General information:
TITO was launched using:
RESULT:

Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -269245 for 1970 contacts (-136.7/contact) +
2D Compatibility (PS) -25720 + (NN) -4067 + (LL) 3508
1D Compatibility (HY) -24800 + (ID) 3500
Total energy: -323824.0 ( -164.38 by residue)
QMean score : 0.230

(partial model without unconserved sides chains):
PDB file : Tito_4UG2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UG2-query.scw
PDB file : Tito_Scwrl_4UG2.pdb: