Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNWENESSPKEFILLGFSDRAWLQMPLFVVLLISYTITIFGNVSIMMVCILDPKLHTPMYFFLTNLSILDL-----CYTTT--TVPH---MLVNIGCNKKTISYAGCVAHLIIFLALGATECLL-LAVMSFDRYVAVCRPLHYVVIMNYWFCLRMA----AFSWLIGFGNSVLQSSLTLNMPRCGHQEVDHFFCEVPALLKLSCA-------DTKPIEAELFFFSVLILLIPVTLILISYGFIAQAVLKIRSAEGRQKAFGTCG------SHMIVVSL---------FYGTAIYMYLQPPSSTSKDWGKM---VSLFYGIITSMLNSLIYSLRNKDMKEAFKRLMPRIFFCKK |
| 3C9L Chain:A ((44-315)) | --------------------------MFLLIMLGFPI----NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEG-----------FFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFRFGENHAIMGVAFTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYG---QLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIF----THQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNDDE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168972 for 1653 contacts (-102.2/contact) +
2D Compatibility (PS) -23139 + (NN) -7491 + (LL) 5164
1D Compatibility (HY) -27200 + (ID) 3350
Total energy: -224988.0 ( -136.11 by residue)
QMean score : 0.208
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