Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTGNWSQVAEFIILGFPHLQGVQIYLFLLLLLIYLMTVLGNLLIFLVVCLDSRLHTPMYHFVSILSFSELGYTAATIPKMLANLLSEKKTISFSGCLLQIYFFHSLGATECYLLTAMAYDRYLAICRPLHYPTLMTPTLCAEIAIGCWLGGLA------------GPVVEISLISRLPFCGPNRIQHVFCDFPPVLSLACTDTSINVLVDFVINSCKILATFLLILCSYVQIICTVLR--IPSAAGK---RKAISTCASHFTVVLIFYGSILSMY-VQLKKSYSLDYDQA------LAVVYSVLTPFLNPFIYSLRNKEIKEAVRRQLKRIGILA |
| 4UG2 Chain:A ((14-304)) | -------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIA--ISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKAHSQ--GCGEGQVACLFEDVVP----------MNYMVYFNFFAC-VLVPLLLMLGVYLRIFLAARRQL-----ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260098 for 1978 contacts (-131.5/contact) +
2D Compatibility (PS) -26132 + (NN) -12050 + (LL) 4104
1D Compatibility (HY) -24400 + (ID) 3900
Total energy: -322476.0 ( -163.03 by residue)
QMean score : 0.361
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