Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQAVDNLTSAPGNTSLCTRDYKITQVLFPLLYTVLFFVGLITNGLAMRIF-FQIRSKSNFIIFLKNTVISDLLMILTFPFKIL-----SDAKLGTGPLRTFVCQVTSVIFYFTMYISISFLGLITIDRYQKTTRPFKTSNPKNLLGAKILSVVIWAFMFLLSLPNMILTNRQPRDKNVKKCSFLKSEFGLVWHEIVNYICQV-IFWINFLIVIVCYTLITKEL---YRSYVRTR----------------------------------GVGKVP--------RKKVNVKVFIIIAVFFICFVPFHF-------ARIPYTLSQTRDVFDCTAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLISMLKCPNSATSLSQDNRKKEQDGGDPNEETPM |
| 4XNW Chain:A ((54-382)) | ----------------------------PAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDA-----MCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPLKSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDF---QTPAM--CAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194744 for 1947 contacts (-100.0/contact) +
2D Compatibility (PS) -27669 + (NN) -7371 + (LL) 3352
1D Compatibility (HY) -32400 + (ID) 3950
Total energy: -262782.0 ( -134.97 by residue)
QMean score : 0.211
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