Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAAIRRQRELSILPKVTLEAMNTTVMQGFNRSERCPRDTRIVQLVFPALYTVVFLTGILLNTLALWVFVHIPSSSTFI-IYLKNTLVADLIMTLMLPFKILSDSHL-APWQLRAFVCRFSSVIFYETMYVGIVLLGLIAFDRFLKIIRPLRNIFLKKPVFAKTVSIFIWFFLFFISLPNTILSNKEATPSSVKKCASLKGPLGLKWH-QMVNNICQFIFWTVFILMLV----FYVVIAKKVYDSYRKSKSKDRKNNKKLEGKVFVVVAVFFVCFAPFHFARVPYTHSQTNNKTDCRLQNQLFIAK-ETTLFLAATNICMDPLIYIFLCKKFTEKLPCMQGRKTTASSQENHSSQTDNITLG |
| 4RWA Chain:A ((127-398)) | ------------------------------------------------ALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQ--SAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSP---SWYWDTVTKICVFLFAFVVPILIITVCYGLMLL---------GSKEKDR-SLRRITRMVLVVVGAFVVCWAPIHIFVIVWTL------VDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201457 for 1869 contacts (-107.8/contact) +
2D Compatibility (PS) -25729 + (NN) -9324 + (LL) 6544
1D Compatibility (HY) -27200 + (ID) 3650
Total energy: -260816.0 ( -139.55 by residue)
QMean score : 0.197
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