Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALTPESPSSFPGLAATGSSVPEPPGGPNATLNSSWASPTEPSSLE-----DLVATGTIGTLLSAM----GVVGVVGNAYTLVVTCRSLRAVASMYVYVVNLALADLLYLLSIPFIVATYVTK-EWHFGDVGCRVLFGLDFLTMHASIFTLTVMSSERYAAVLRPLDTVQRPKGYRKL-LALGTWLLALLLTLPVMLAMRL-VRRGPKSLCLPAWGPRAHRAYLTLLFATSIAG---PGLLIGLLYARLARA--YRRSQ------------------------------------------RASFKRARRPGAR-ALRLVLGIVLLFWACFLPFWLWQLLA-----QYHQAPLAPRTARIVNYLTTCLTYG----NSCANPFLYTLLTRNYRDHLRGRVRGPGSGGGRGPVPSLQPRARFQRCSGRSLSSCSPQPTDSLVLAPAAPARPAPEGPRAPA |
4XNW Chain:A ((37-382)) | ----------------------------------------------SSFKCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPLKSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRV--YATYQVTRGLASLNSCVNPILYFLAGDTFRRR---------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -204898 for 1965 contacts (-104.3/contact) +
2D Compatibility (PS) -28801 + (NN) -13649 + (LL) 1300
1D Compatibility (HY) -30000 + (ID) 3900
Total energy: -279948.0 ( -142.47 by residue)
QMean score : 0.284
|
|
|