Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKENLDSHLPPSQNTSELNTA
3NUX Chain:A ((10-301))---------DQQYECVAEIGEGA-GKVFKARDLKNGGRFVALKRVR--------PLSTIREVAVLRHLETFEHPNVVRLFDVC--------TKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA-------------VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH-KSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ-------------------------


General information:
TITO was launched using:
RESULT:

Template: 3NUX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181187 for 2038 contacts (-88.9/contact) +
2D Compatibility (PS) -27454 + (NN) -13305 + (LL) 4048
1D Compatibility (HY) -39600 + (ID) 13050
Total energy: -270548.0 ( -132.75 by residue)
QMean score : 0.806

(partial model without unconserved sides chains):
PDB file : Tito_3NUX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NUX-query.scw
PDB file : Tito_Scwrl_3NUX.pdb: