Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGQPGHMPHGGSSNNLCHTLGPVHPPDPQRHPNTLSFRCSLADFQIEKKIGRGQFSEVYKATCLLDRKTVALKKVQIFEMMDAKARQDCVKEIGLLKQLNHPNIIKYLDSFIE--DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSETTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPGEHYSEKLRELVSMCICPDPHQRPDIGYVHQVAKQMHIWMSST |
2XKC Chain:A ((7-262)) | -------------------------------------------DYEVLYTIGT--YGRCQKIRRKSDGKILVWKELDYGSMTEAE-KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS-----LKPANVFLDGKQNVKLGD------------------GTPYYMSPEQMNR---NEKSDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGKFRRIP-YRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHHHHH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2XKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -119445 for 1613 contacts (-74.1/contact) +
2D Compatibility (PS) -23629 + (NN) -14017 + (LL) 1752
1D Compatibility (HY) -20800 + (ID) 4300
Total energy: -180439.0 ( -111.87 by residue)
QMean score : 0.552
|
|
|