Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVANCGQVVSYLAPCISYAMGRVSAPGGGCCSGVRGLNAAA--------ATPADRK-TTCTCLKQQASGIGGIKPNLVAGIPGKCGVNIPYAISQGTDCSKVR-----
4HLB Chain:A ((21-115))
---DSDRFTAFEEELLARYADK----------GIRSVDVAAYAKGIDIVFVAADRKMTRAEFSAIASRSIRELKERFGFDKDVPIGAVLDYKKDAATDTRTRFVLKLR
General information:
TITO was launched using:
RESULT:
Template:
4HLB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20465 for 465 contacts (-44.0/contact) +
2D Compatibility (PS) -7864 + (NN) 3579 + (LL) 216
1D Compatibility (HY) 0 + (ID) 750
Total energy: -25284.0 ( -54.37 by residue)
QMean score : 0.100
(partial model without unconserved sides chains):
PDB file :
Tito_4HLB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HLB-query.scw
PDB file :
Tito_Scwrl_4HLB.pdb
: