Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----GTSDLCGLAETA---FGECTAYV------------AGGEPAVSRRCCRALGDIRDLAATAAERRAVCACILSEMLAAGDGRVDSGRAAGLPAACNVRVGFIPTSPNFNCFRVR
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKC-----MCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM--------SQPCQM--
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37788 for 555 contacts (-68.1/contact) +
2D Compatibility (PS) -8136 + (NN) 2286 + (LL) 980
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -47058.0 ( -84.79 by residue)
QMean score : 0.152
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: