Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--LTPCEEATNLLTPCLRYLWAPPEAKPSPECCSGLDKVNKG---VKTYDDRHDMCICLSSEAAITSADQYKFDNLPKLCNVALFAPVGPKFDCSTIKV
1F53 Chain:A ((1-84))
IDHVPCRGGENFLK-----IWSHSGGQQSVDCYANRGRIDFGGWWVDKISTGNNDLIYYDANGDSVRVDRWHDITYPN---------RPPKVNSIEIL-
General information:
TITO was launched using:
RESULT:
Template:
1F53.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13603 for 568 contacts (-23.9/contact) +
2D Compatibility (PS) -7849 + (NN) 1528 + (LL) 1276
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -23798.0 ( -41.90 by residue)
QMean score : 0.179
(partial model without unconserved sides chains):
PDB file :
Tito_1F53.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F53-query.scw
PDB file :
Tito_Scwrl_1F53.pdb
: