Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--ATCTPTQLTPCAPAIVGNSPPTAACCGKLKAHPASCFCQYKKDPNMKKYVNSPNGKKVFATCKVPLPKC-----------------
1JG5 Chain:A ((1-83))
PYLLISTQIRMEVGPTMVGDEHSDPELMQQLGASKRR-----VLGNNFYEYYVNDPPRIVLDKLECRGFRVLSMTGVGQTLVWCLHKE
General information:
TITO was launched using:
RESULT:
Template:
1JG5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3222 for 400 contacts (-8.1/contact) +
2D Compatibility (PS) -6844 + (NN) -6532 + (LL) 456
1D Compatibility (HY) -5200 + (ID) 400
Total energy: -21742.0 ( -54.36 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_1JG5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JG5-query.scw
PDB file :
Tito_Scwrl_1JG5.pdb
: