Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVVPPSRCNPTLLTPCAGPA--LFGGPVPPACCAQLRAQ-----AACLCAYARSPNYGSYIRSPNA-RRLFAVCGLPMPQCS
1HYP Chain:A ((6-73))
-----PSCP--DLSICLNILGGSLGT--VDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPS--
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32625 for 365 contacts (-89.4/contact) +
2D Compatibility (PS) -6468 + (NN) -5472 + (LL) 112
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -49603.0 ( -135.90 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: