Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------TEVKLSGGEADVTCDAVQLSSCATPMLTGVPPSTECC--------GKLKEQQPCF--CTYIKDPRYSQ-YVGSANAKKTLATC-----GVP-YPTC---------
2OPC Chain:A ((13-127))
EGYTRFYRSPTASVILSGLVKVKWDNEQMTMPLFKWIGGEQAEELHFCVHIAHSSGPKLNRARSLGTVNSNMDQHWAQAQRNSGATRRTIEGFHLFENDIPNFPDYIKIKLVPKT
General information:
TITO was launched using:
RESULT:
Template:
2OPC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7164 for 394 contacts (-18.2/contact) +
2D Compatibility (PS) -8470 + (NN) -44 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -17928.0 ( -45.50 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_2OPC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OPC-query.scw
PDB file :
Tito_Scwrl_2OPC.pdb
: