Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPPLGTCGAQL---SQLAPCARYSVPPLP--GQALP-----APGPECCSALGSVSRDCACGAID-----------------IINSLPAKCGLPRVSCQ
1S6D Chain:A ((8-102))
---ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQPCQ
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42307 for 418 contacts (-101.2/contact) +
2D Compatibility (PS) -6901 + (NN) -2326 + (LL) -160
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -58744.0 ( -140.54 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: