Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QECGNDLANVQVCAAMVLP-------GSGR-----PNSECCAALQSTNRDCLCNALR-----------------AATSLPSLCNLPPVDCGINA
1S6D Chain:A ((19-102))
-------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQPCQ---
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31582 for 334 contacts (-94.6/contact) +
2D Compatibility (PS) -5905 + (NN) -4956 + (LL) 396
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -48047.0 ( -143.85 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: