Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KDEC--GATPPD------QEALKLVPCVAAGKDPDSKPSDRCCAAVKEIGERSPACLCAVLLSKIVRRVGVKPEVAITIPKRCDLTDRPIGYK-----CGDYTMPSLQLKD-------------
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGS--QVP-EAVLRDCCQQLAHI---SEWCRCGALYSMLDS--MYKEH---GAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9224 for 506 contacts (-18.2/contact) +
2D Compatibility (PS) -8967 + (NN) -5788 + (LL) 748
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -26081.0 ( -51.54 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: