Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNA--------AARTTPDRQTACNCLKQAAGSIPNLNPNNAVGL----------PRACGVSIPYKISISTD----CSKVR
1GOU Chain:A ((1-109))
----AVINTFDGVADYLIRYKRLPNDYITKSQASALGWVASKGDLAEVAPGKSIGGDVFSNREGRLPSAGSRTWREADINYVSGFRNADRLVYSSDWLIYKTTDHYATFTRIR
General information:
TITO was launched using:
RESULT:
Template:
1GOU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35756 for 559 contacts (-64.0/contact) +
2D Compatibility (PS) -9263 + (NN) -4695 + (LL) 140
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -52624.0 ( -94.14 by residue)
QMean score : 0.190
(partial model without unconserved sides chains):
PDB file :
Tito_1GOU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GOU-query.scw
PDB file :
Tito_Scwrl_1GOU.pdb
: