Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCGQVTSSLAPCIGYLTGNGAGGVPPGCCGGIKSLNSAA------QTTPDRQAACKCIK---------SAAAGISGI-NYGIASGLPGKCGVNI-PYKISPSTDCNSVK--------
2Z15 Chain:A ((8-126))
SGMQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHIGEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDN
General information:
TITO was launched using:
RESULT:
Template:
2Z15.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35664 for 606 contacts (-58.9/contact) +
2D Compatibility (PS) -9354 + (NN) 2765 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -47903.0 ( -79.05 by residue)
QMean score : 0.158
(partial model without unconserved sides chains):
PDB file :
Tito_2Z15.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z15-query.scw
PDB file :
Tito_Scwrl_2Z15.pdb
: