Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ADNDCAVAQTAFGDCAGYVAGVENKLSPRCCRALADIRDMAPTFVRQRALCACIHKEMVAAGKVVTR-RAAALPGRCGVRISFLPTTHNFDCSRIPRAD
1L6H Chain:A ((1-69))
--AGCN--AGQLTVCTGAIAG-GARPTAACCSSL-----------RAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIAL---PTCH-----------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27232 for 513 contacts (-53.1/contact) +
2D Compatibility (PS) -6751 + (NN) 1103 + (LL) 2096
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -34534.0 ( -67.32 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: