Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQ----VTSSLASCIPFLTK--------GGAVPASCCSGVRSL----------NAAAKTTPDRQVCNCLKSAAGAIPGFNANNAGIL------PGKCGVSIHYNIS--TSTNCATIKF----
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHISEWCRCGALYSMLDS--MYKEH--------GAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27590 for 415 contacts (-66.5/contact) +
2D Compatibility (PS) -7914 + (NN) 894 + (LL) 500
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -40110.0 ( -96.65 by residue)
QMean score : 0.289
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: