Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------------QQIQDFIDCLNVIIYFSSCIGYIDGHVREPTWGCCMGVHELNRLVKQDRDAQKICQCIELIAAVDD-----PPFVLANIDALPSKCQTHLSFPISVKKNCSEVQ-----
1UG7 Chain:A ((1-128))
GSSGSSGMSEVTRSLLQRWGASLRRGADFDSWGQLVEAIDEYQILARHLQKEAQAQH-----NNSEFT--EEQKKTIGKIATCLELRSAALQSTQSQEEFKLEDLKKLEPILKNILTYNKEFPFDVQPISGPSSG
General information:
TITO was launched using:
RESULT:
Template:
1UG7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39276 for 657 contacts (-59.8/contact) +
2D Compatibility (PS) -9269 + (NN) -547 + (LL) 580
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -52762.0 ( -80.31 by residue)
QMean score : 0.097
(partial model without unconserved sides chains):
PDB file :
Tito_1UG7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UG7-query.scw
PDB file :
Tito_Scwrl_1UG7.pdb
: