Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-LSCGQVTS----GLAPCLPYLQGSGPLGGC----CGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIP-YKISPSTDCSKVQ----
2A10 Chain:A ((4-107))
QSAVGSIETIGFPGILAAADAMVKAGRITIVGYIRAGSARFTLNIRGDVQEVKTAMAAGIDAINRTEGADVKTWVIIPRPHENVVAVLPIDFSPEVEPFREAAE
General information:
TITO was launched using:
RESULT:
Template:
2A10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36570 for 660 contacts (-55.4/contact) +
2D Compatibility (PS) -9223 + (NN) -1046 + (LL) 0
1D Compatibility (HY) 0 + (ID) 750
Total energy: -47589.0 ( -72.10 by residue)
QMean score : 0.316
(partial model without unconserved sides chains):
PDB file :
Tito_2A10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A10-query.scw
PDB file :
Tito_Scwrl_2A10.pdb
: