Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--ITCGQ-V-ASSLTSCIPFITKGGIVPPSCCAGVKSLNAA-AKTTPDRQAVCNCLKSEAG----RIGGFNANNAAIL--PGKCGVSIPYKISTSTNCASIKF---------------------
2OVS Chain:A ((1-118))
GLVPRGSMIMKDGIYS-IIFISNED----SCGEGILIKNGNMI-TGGDIASVYQGVLSEDEDIILHVHRYNYEIPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLV
General information:
TITO was launched using:
RESULT:
Template:
2OVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29671 for 481 contacts (-61.7/contact) +
2D Compatibility (PS) -9231 + (NN) -2577 + (LL) 236
1D Compatibility (HY) -6000 + (ID) 950
Total energy: -48193.0 ( -100.19 by residue)
QMean score : 0.201
(partial model without unconserved sides chains):
PDB file :
Tito_2OVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OVS-query.scw
PDB file :
Tito_Scwrl_2OVS.pdb
: