Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------AITCGQVSSAIAPCLSYARGTGS------GPSASCCSGVRNLKSAAS--TAADRRAACNCLKNAARGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRHRVN-
2KT9 Chain:A ((1-116))
MAASTVHTSFILKVLWLDQNVAIAVDQIVGKGTSPLTSYFFWPRADAWQQLKDELEAKHWIAEADRINVLNQATEVINFWQDLKNQNKQISMAEAQGKFPEVVFSGSNLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KT9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27413 for 534 contacts (-51.3/contact) +
2D Compatibility (PS) -9931 + (NN) -3405 + (LL) 0
1D Compatibility (HY) 0 + (ID) 800
Total energy: -41549.0 ( -77.81 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_2KT9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KT9-query.scw
PDB file :
Tito_Scwrl_2KT9.pdb
: