Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCDPVELSACANAI--TSSSPPSAICCSKLKQQ-----RPCLCQYVKNPNLQKLVNSPNA-KKVATICGSPFPNC
1HYP Chain:A ((10-73))
------DLSICLNILGGSLGT--VDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPS-
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25912 for 333 contacts (-77.8/contact) +
2D Compatibility (PS) -5641 + (NN) -1423 + (LL) 8
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -38468.0 ( -115.52 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: