Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQTCAGQL---RGLAPCLRYSVPPLP--GQVPP-----APGPECCSALGAVSRDCACGTFS-----------------IINSLPAKCALPPVSCQ
1S6D Chain:A ((9-102))
-SGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQPCQ
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44799 for 414 contacts (-108.2/contact) +
2D Compatibility (PS) -6695 + (NN) -3482 + (LL) 120
1D Compatibility (HY) -6800 + (ID) 1000
Total energy: -62656.0 ( -151.34 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: