Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNCSAAIGGLMSCGPYVLP-------GNQ----LTPSTQCCSAIQAVNHGCLCETIN-----------------IISSLPGHCSLPPVSCGTA
1S6D Chain:A ((19-102))
-------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQPCQ--
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47258 for 346 contacts (-136.6/contact) +
2D Compatibility (PS) -5586 + (NN) 947 + (LL) 756
1D Compatibility (HY) -5600 + (ID) 700
Total energy: -57441.0 ( -166.01 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: