Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DWAEDKKECSNQLVALSTCIPFVGGNTKVPDSTCCTNLRKKINQTK-------KCLCLLVADRNDPDLGFKVNATLALILPSICHAPSNASECPAEANKSSQ
1AFH Chain:A ((3-80))
-------SCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAA-AGVS-GLNAGNAASIPSKCGVSIP-------------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26474 for 526 contacts (-50.3/contact) +
2D Compatibility (PS) -7465 + (NN) -5128 + (LL) 1364
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -40603.0 ( -77.19 by residue)
QMean score : 0.252
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: