Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAATTCNAGQLAACAAAV--MTGAKPSAACCSNLRAQ-----QRCFCNYAKNPVYGRYIKSPYV-RQTVATCGIVLPRC
1HYP Chain:A ((6-73))
---PSCP--DLSICLNILGGSLGT--VDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPS-
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31721 for 365 contacts (-86.9/contact) +
2D Compatibility (PS) -5781 + (NN) 2785 + (LL) 528
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -38389.0 ( -105.18 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: