Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SDACTGLPGLLNCAPFLLGSVSSP--------------DAKCCKSLKWLSQHAINREDKRELCKC----LKIEDLKHKGVILDRAKAL-PRLCKVQLPVP------LIPDNKDCDKIKAADEE----
3ZCO Chain:A ((12-138))
ETISKKIIGMSLLMRTFLYTLAQETEGTNRHTLALETVLIKMVKMLRDNPGYKASKEIKKVICGAWEPAITIEKLKQFSWISVVNDLVGEKLVVVVLEEPSASIMVELKLPLEINYAFSMDEEFKNM
General information:
TITO was launched using:
RESULT:
Template:
3ZCO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3462 for 626 contacts (-5.5/contact) +
2D Compatibility (PS) -10139 + (NN) 238 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -19163.0 ( -30.61 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_3ZCO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZCO-query.scw
PDB file :
Tito_Scwrl_3ZCO.pdb
: