Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQPANCNGQLNQLIPCLSYVQGQATQPAQGCCSGLKSIAGSN-------PACLCSLISANAGSIPGINSTLALELPAKCNLQGL----NPSLCSGKF
1AFH Chain:A ((3-91))
-----SCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSR--
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40912 for 579 contacts (-70.7/contact) +
2D Compatibility (PS) -8038 + (NN) -3198 + (LL) 708
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -56740.0 ( -98.00 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: