Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SHNVGALASSCEESDFLYKSLPCVKGGTVMSTPSSQCCVAVRAM----ALECLCRLIVSATGA-SSEQTVKNYVKTCKMKAPPGFKC
1HYP Chain:A ((21-77))
----------------------------SLGT-VDDCCALIGGLGDIEAIVCLCIQLRA-LGILNLNRNLQLILNSCGRSYPSNATC
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32085 for 287 contacts (-111.8/contact) +
2D Compatibility (PS) -5288 + (NN) -2813 + (LL) 1020
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -43316.0 ( -150.93 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: