Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSNNYIQLAGCLNAVSSSAGYPGSSCCTAVSHFKNDVNCLC---STLVAAKNAGVIRNMPNALTVP-----------KRCGFKNNIPKNFRCAGYKVGS----
4EYT Chain:A ((10-106))
-KQNCLIKIINI------PQGTLKAEVVLAVRHLGYEFYCDYIDGQAMIRFQNSDEQRLAIQKLLNHNNNKLQIEIRGQICDVISTIPEDEEKNYWNYIKFKKN
General information:
TITO was launched using:
RESULT:
Template:
4EYT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49677 for 488 contacts (-101.8/contact) +
2D Compatibility (PS) -8085 + (NN) 1535 + (LL) 520
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -60357.0 ( -123.68 by residue)
QMean score : 0.309
(partial model without unconserved sides chains):
PDB file :
Tito_4EYT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EYT-query.scw
PDB file :
Tito_Scwrl_4EYT.pdb
: