Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------AIACNDLLETLYPCVEFITSPGFSDPSSPC---CDGIKRINDEAITTLDRQNVCKCLKPVVPVLPGLNPD----------NFATLPDKCGVNLLFSISPHMNCNKIN--------------------
1TM9 Chain:A ((1-137))MEQNNIKEQLISFFNQACSTHQERLDFICSTRESDTFSSVDVPLEPIKNIIEITKDENQQIEITKIAVNNIKTLSSVGATGQYMASFFSTNSEPAIIFCVIYFLYHFGFLKDNNKKQIIKKAYETIADNIADYLNEN


General information:
TITO was launched using:
RESULT:

Template: 1TM9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31710 for 569 contacts (-55.7/contact) +
2D Compatibility (PS) -9612 + (NN) -5382 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -48804.0 ( -85.77 by residue)
QMean score : 0.324

(partial model without unconserved sides chains):
PDB file : Tito_1TM9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TM9-query.scw
PDB file : Tito_Scwrl_1TM9.pdb: