Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFLNTHPKKKEIVAEFNNEHYINESDLKTLEEGKDLVDKINNINLIQQNEESEELNIGKVLA
2VEQ Chain:A ((545-562))
-------SDFRTIVEEFQSEYNISDILS-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2VEQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1939 for 63 contacts (30.8/contact) +
2D Compatibility (PS) -1986 + (NN) -980 + (LL) 2668
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 141.0 ( 2.24 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_2VEQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VEQ-query.scw
PDB file :
Tito_Scwrl_2VEQ.pdb
: