Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFNSLLVFDIETIPDVNSCRNLLNISDDSSLKEKRNALTKYHLEITNGQNPFLRQPFHQVIVISFLLCSVTYQSNYEVFTLQEIRSEGTLDSSEKELVKGFFNCVSEKKPR-LISFNGRTFDIPVLKYR--------AMVHDVQAEYFHKAGDKWNSYNQRYSSNWHCDLLESLSDFGAFARVKMNEVC-AVFNLPGKIGVDGSQVVDLYDSGR-IQEIRDYCETDVVNTYLIYLRFMHHQGRITTRSYNKNIEELLLECEKKAHLRKFKEEWEITCGGRFCVEFK |
4K8X Chain:A ((185-334)) | -------------------------------------------------------------------------------------------STEKEMIKRFLRVVREKDPDVLITYNGDNFDFAYLKKRCEELGIKFTLGRDGSEPKIQRMGDR---FAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGKP-KEKVYAEEIAQAWESGEGLERVARYSMEDAKVTYELGREFFPMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAYKRNELAPNKPDER |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50218 for 862 contacts (-58.3/contact) +
2D Compatibility (PS) -14236 + (NN) -945 + (LL) 6280
1D Compatibility (HY) -10000 + (ID) 1950
Total energy: -71069.0 ( -82.45 by residue)
QMean score : 0.185
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